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Konnect2prot has been published in bioinformatics

FOOD IN CRYPTO ARENA

Protein-protein interactions are central to understanding the functional relationship between proteins. We have curated the available information and augmented with context-specific analysis to ease your research journey.

PALWORLD CRYPTO

This is an indigenously developed web-based application designed by Dr. Samrat Chatterjee and his group, which can generate context-specific directional PPI networks from the input proteins and detect their biological and topological importance in the network. konnect2prot (k2p) contains data curated from various databases with multidimensional information to build a network relevant to the end user. This platform is also equipped with network algorithms that can further enhance the decision making process.

About Us

PRICE OF BLOCKCHAIN

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BEST CRYPTO NEWS WEBSITES

We study biological systems in their entirety or in fragments through the lens of system biology. The former covers topics such as network biology, machine learning-based drug discovery, and so forth, while the latter covers various differential equation based kinetic models. The group is supervised by Dr. Samrat Chatterjee and consists of post doctoral fellows, PhD student and research fellows. They are mainly from mathematical and computational backgrounds keen to work on biological problems in an interdisciplinary environment.

Read More

Some significant recent publications from the group.

FUD IN CRYPTOBLAZE CRYPTOHOW TO BUY FLOKI INU ON COINBASEBINANCE PYTHON APICRYPTO DAY TRADING SIMULATOR

CRYPTO MACHINES INGAS STATIONGEORGE CRYPTO R USCRYPTO BASE SCANNERFINK CRYPTOCROB CRYPTO

CRYPTO FUNK STRAIN LEAFLYCRYPTO TRADERWHAT DOES BURN CRYPTO MEANCRYPTO WHALE TRACKERCRYPTO BASTION 25MSHENBLOOMBERG

Features

BLUZELLE CRYPTO

Directionality

کوین مارکت گپ

Context-specificity

CAGA CRYPTO

Spreaders

COINS TO BUY RIGHT NOW

Network topology

COINBASE PRIVATE KEY

Structural information

BITBOY CRYPTO LAMBORGHINI

Enrichment analysis

LADY OF CRYPTO

Disease interactome

NO DEPOSIT CRYPTO BONUS

PTM

CRYPTO SALARY

Protein classes

BEST LONG TERM CRYPTO

Team

CRYPTO NEWS NEO

Other contributers: Ekant Sharma, Komal Sharma, Krishna

Acknowledgement

FIRST VIP WALLET

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Department of Biotechnology

We would like to thank DBT for proving us the finanical support for this project.

Funding body by Govt. of India

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OmniPath

We would like to thank OmniPath for providing directional relationship of protein pairs.

Directional database for PPI

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Signor 2.0

We would like to thank signor for providing directional relationship of protein pairs.

Directional database for PPI

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DisGeNET

We would like to thank disgenet for providing disease information related to protein.

Disease database

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Kyoto Encyclopedia of Genes and Genomes (KEGG)

We would like to thank KEGG for providing information of biological pathways associated with proteins.

Biological pathway database

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Gene ontology (GO)

We would like to thank GO for providing information of biological process and molecular functions associated with proteins.

Biological ontology database

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The Human Protein Atlas (HPA)

We would like to thank HPA for providing information of tissue specific expression and subcellular associated with proteins.

Human Protein Atlas

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Translational Health Science and Technology Institute

We would like to thank THSTI for providing the infrastructure to carry out the work.

THSTI

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Uniprot

We would like to thank uniprot for providing detailed information of protein charaterstics including its functions and pathways.

Protein information database

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Enrichr

We would like to thank Enrichr for providing enrichment score of pathway, functions and diseases.

Protein enrichment webserver

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Protein data bank (PDB)

We would like to thank PDB for providing structure related information.

Protein structure database

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The Drug Gene Interaction Database (DGIdb)

We would like to thank DGIdb for providing information of ligands and classes associated with proteins.

Drug target database

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Signalink

We would like to thank signalink for providing information of signalling pathways associated with proteins.

Signalling pathway database

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Database of Curated Mutations (DoCM)

We would like to thank DoCM for providing information of disease-causing mutations associated with proteins.

Disease mutation database

We would also like to pass our gratitude to open source software develpers of Flask, Python, Dash (Plotly), MongoDB.

FAQ

COINBASE ERRORS

k2p is a one-stop junction for identifying the spreaders in a PPI network constructed from user-given inputs. It is a web application of directional PPI which can be filtered according to user-driven context. Currently, context-specificity is defined as filtering the network through the use of localization, pathways, biological processes, molecular functions, and tissue specificity. Additionally, it also displays structural insights into the proteins, their available ligands, and disease-specific mutations.

k2p has used Enrichr for the enrichment of biological pathways and ontological enrichment.

CRYPTO CLUB ELON MUSK

We have made this far on our own, collectively we can accomplish much more !!!

HOW LONG DOES COINBASE HOLD FUNDS
DUMPING CRYPTO